Chasing unpaid invoices is one of the most demoralising parts of freelance work. You deliver the project, you do good work, and then you spend the next 30 days sending awkward follow-up emails. The right invoicing software does not just generate PDFs — it automates the follow-up, makes it frictionless for clients to pay, and connects your time logs to your billing so you are never leaving money on the table.
We evaluated seven invoicing tools on the dimensions that matter most to freelancers: ease of setup, payment options, automatic reminders, time tracking integration, recurring invoices, and total cost including transaction fees. Here is the honest breakdown.
What to look for in invoicing software
Not all invoicing tools are created equal, and the feature that matters most depends on how you work. Before diving into the individual tools, here are the five criteria that separate the good from the mediocre:
Automatic payment reminders
Manual follow-up is both time-consuming and psychologically draining. Good invoicing software sends automated reminders at configurable intervals (e.g., 3 days before due, on due date, 7 days overdue, 14 days overdue) without you having to remember. Studies consistently show that automated reminders reduce average payment times by 30–50%.
Recurring invoices
If you manage retainer clients, recurring invoice automation is non-negotiable. The software should auto-generate invoices on a schedule (weekly, monthly, quarterly), optionally auto-send them, and track which ones have been paid without manual intervention.
Payment integrations
Credit card, ACH/bank transfer, and ideally international payments. The fewer hoops a client has to jump through to pay you, the faster you get paid. Also check what the transaction fees are — they vary widely and can represent a meaningful cost at scale.
Time tracking integration
For hourly freelancers, the ability to log time against a project and convert those logs directly into a line-itemised invoice saves 30–60 minutes per invoice. Native time tracking (not a third-party integration) is more reliable and less friction.
Expense tracking
If you pass costs through to clients — software licenses, travel, third-party vendors — your invoicing tool should let you attach expenses to a project and include them on the final invoice. This prevents unbilled expenses from slipping through the cracks.
Top 7 invoicing tools for freelancers
1. OnBrio — Best for freelancers growing toward agency
OnBrio sits at the intersection of invoicing and full agency management. If you are a solo freelancer who also handles proposals, projects, and client communication, OnBrio eliminates the need for separate tools. Time tracking is native — you log hours against a project and generate the invoice in two clicks with all line items pre-filled.
Pros:
- Time tracking → invoice automation (no manual reconciliation)
- Recurring invoices with auto-send
- Automatic payment reminders with customisable sequences
- No transaction fees at any tier
- Proposals, contracts, and project management in the same tool
- White-labelled client portal
- 5 team seats on the entry plan ($29/month) — room to grow
Cons:
- More feature-rich than a pure invoicing tool — may be more than some solos need
- Not as deep on accounting features as FreshBooks or QuickBooks
See the full feature breakdown at OnBrio invoicing features.
2. FreshBooks — Best for freelancers who work with accountants
FreshBooks is one of the most mature invoicing tools on the market and is particularly strong if you have an accountant or bookkeeper. The double-entry accounting, P&L reports, and CPA-friendly export formats make tax time significantly easier. FreshBooks has been polishing its invoicing UX for over 15 years and it shows.
Pros:
- Excellent accounting and bookkeeping features
- Time tracking included on all plans
- Strong recurring invoice tooling
- Good client portal for invoice and document sharing
- Robust expense tracking with receipt scanning
Cons:
- $17/month entry plan but 2% fee on ACH payments (credit card also carries standard processing fees)
- 5-client limit on the cheapest plan — you need the Plus plan ($30/month) for more
- No proposal or e-signature tooling
- No project management
See OnBrio vs FreshBooks for a full comparison.
3. HoneyBook — Best for creative freelancers with simple billing
HoneyBook bundles invoicing with proposals, contracts, and client communication. If you are a photographer, designer, or event planner and want one tool for the entire client lifecycle, HoneyBook's all-in-one approach is genuinely appealing. The invoicing UX is clean and clients find it easy to pay.
Pros:
- All-in-one: proposals, contracts, and invoices in the same flow
- Clean, professional invoice templates
- Automatic payment reminders included
- Excellent client-facing experience
Cons:
- 2.9% + $0.25 transaction fee on all payments (non-negotiable, all plans)
- Price increase of 89% in February 2025 — Essentials now $19/month (annual)
- No time tracking
- No ACH/bank transfer option without credit card fees
4. Bonsai — Best for hourly freelancers
Bonsai's native time tracking → invoice workflow is one of the best in the category. You start a timer, assign it to a project, stop it when done, and Bonsai builds the invoice from your time log automatically. If hourly billing is your primary model, this is a meaningful efficiency gain.
Pros:
- Native time tracking with direct invoice generation
- Expense tracking with receipt upload
- Clean, fast UI
- Proposals and contracts included
- Tax estimation for US freelancers
Cons:
- 2.9% + $0.25 transaction fee (no fee-free payment option)
- US-centric — international freelancers encounter limitations
- Limited team features
Beautiful proposals, built-in e-signature, and automatic contract generation.
5. Wave — Best free option
Wave is the go-to recommendation for freelancers who want zero-cost invoicing. The core invoicing, accounting, and receipt scanning features are genuinely free — Wave monetises through payment processing (2.9% + $0.60 for credit cards, 1% for ACH) and optional paid add-ons.
Pros:
- Free invoicing, accounting, and receipt scanning
- Unlimited invoices and clients at no cost
- Basic bookkeeping and profit/loss reporting
- Decent accounting tools for freelancers who self-manage their books
Cons:
- No time tracking
- No proposals or contract tooling
- Higher ACH fee (1%) compared to competitors
- Customer support is limited on the free tier
- Wave Payroll and Wave Advisors are paid add-ons that can significantly increase total cost
6. QuickBooks — Best for established freelancers with complex accounting needs
QuickBooks is the industry standard for small business accounting in the US. If you have employees, complex expenses, payroll, or multi-entity accounting, QuickBooks is where you will eventually land. For pure invoicing, it is overkill and overpriced — but if accounting depth is your priority, nothing beats it.
Pros:
- Deepest accounting features in the category
- Excellent accountant integration (most CPAs know it)
- Payroll, sales tax tracking, inventory management
- Strong reporting and forecasting tools
Cons:
- Starts at $30/month and quickly reaches $85+/month for features freelancers actually need
- No proposals or contracts
- No project management
- UI complexity is high — it is a full accounting platform, not a freelance tool
7. AND.CO (now folded into Fiverr Pro) — Best for Fiverr platform users
AND.CO was an independent freelance tool that Fiverr acquired and has since integrated into Fiverr Pro. The standalone AND.CO product is still available but receives limited development attention. If you work primarily on the Fiverr platform, the integrated invoicing experience is convenient. For independent freelancers, there are better options.
Pros:
- Simple, fast invoicing for solos
- Good time tracking and basic project tracking
- Seamless for Fiverr Pro users
Cons:
- Limited development as a standalone product
- Not suitable for agencies or teams
- Limited integration ecosystem
Feature comparison table
| Feature | OnBrio | FreshBooks | HoneyBook | Bonsai | Wave | QuickBooks |
|---|---|---|---|---|---|---|
| Recurring invoices | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Auto reminders | ✓ | ✓ | ✓ | ✓ | Basic | ✓ |
| Time tracking | ✓ | ✓ | ✗ | ✓ | ✗ | ✓ |
| Expense tracking | ✓ | ✓ | ✗ | ✓ | ✓ | ✓ |
| Proposals + contracts | ✓ | ✗ | ✓ | ✓ | ✗ | ✗ |
| Transaction fees | None | 2% ACH | 2.9%+ | 2.9%+ | 1% ACH | Varies |
| Project management | ✓ | ✗ | ✗ | ✗ | ✗ | ✗ |
| Team seats (entry) | 5 | 1 | 1 | 1 | 1 | 1 |
| Starting price | $29/mo | $17/mo | $19/mo | $25/mo | Free | $30/mo |
Pricing comparison
Sticker price is rarely the full story. Here is the effective monthly cost for a freelancer billing $5,000/month (5 invoices × $1,000 average), on the entry-level plan:
- OnBrio ($29/mo + $0 fees): $29/month
- FreshBooks ($17/mo + 2% ACH on $5,000): $17 + $100 = $117/month
- HoneyBook ($19/mo + 2.9% on $5,000): $19 + $145 = $164/month
- Bonsai ($25/mo + 2.9% on $5,000): $25 + $145 = $170/month
- Wave (free + 1% ACH on $5,000): $0 + $50 = $50/month
- QuickBooks ($30/mo + processing fees): $30+ per month, processing fees vary
The transaction-fee tools look cheap on the surface but cost significantly more at real billing volumes. At $5,000/month, Wave is the cheapest option if you accept ACH payments. But Wave has no time tracking, no proposals, and limited support — so the total cost-of-ownership picture shifts once you account for tools you need alongside it.
Best for different use cases
- Best for zero budget: Wave. Free invoicing with decent accounting. Add a separate proposal tool if you need it.
- Best for hourly billing: Bonsai or OnBrio. Both have native time tracking → invoice. OnBrio wins on team features and no transaction fees.
- Best for creative freelancers (photos, events, design): HoneyBook. Best all-in-one experience for this audience despite the price increase.
- Best for accounting depth: FreshBooks or QuickBooks. FreshBooks is more freelancer-friendly; QuickBooks is better for complexity.
- Best for growing agencies: OnBrio. The only tool on this list with project management, team seats at entry price, and no transaction fees.
Our recommendation
If you are a freelancer who expects to grow — or who already manages multiple clients and projects simultaneously — OnBrio is the invoicing tool we recommend. The combination of native time tracking, recurring invoices, automatic reminders, no transaction fees, and built-in project management means you are not adding tools as you grow; you are already running on the right foundation.
If you are a solo freelancer on a tight budget who only needs basic invoicing, Wave is the honest recommendation. It is free, it works, and you can always migrate later.
If you are primarily hourly and want the cleanest time-to-invoice workflow specifically, Bonsai's UX for that specific flow is excellent — just factor in the transaction fees when comparing total cost.
Read more: How to get paid faster as a freelancer · OnBrio invoicing features
Common questions
What is the best invoicing software for freelancers who bill hourly?
Bonsai or OnBrio — both convert time logs directly into invoices without manual reconciliation. OnBrio has no transaction fees and includes team features as you grow.
What is the best free invoicing software?
Wave — free invoicing, accounting, and receipt scanning with unlimited invoices and clients, though it has no time tracking or proposal tooling.
How much do transaction fees actually cost freelancers?
At $5,000/month in billing, a 2.9% fee like the ones HoneyBook and Bonsai charge adds about $145/month — often more than the software subscription itself.
Do I need accounting software or just invoicing software?
If you have an accountant or complex bookkeeping needs, FreshBooks or QuickBooks are built for that depth. If you just need to bill clients and get paid, dedicated invoicing tools like OnBrio or Wave are simpler and cheaper.
What should I look for beyond just sending invoices?
Automatic payment reminders, which cut payment times by 30–50%, recurring invoice automation for retainer clients, and time tracking integration if you bill hourly.
Send proposals that close in minutes, not weeks.
Beautiful proposals, built-in e-signature, and automatic contract generation.